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f | 1 | { | f | 1 | { |
2 | "Observaciones": { | 2 | "Observaciones": { | ||
3 | "en": "Recomended citation: A clinical trials corpus annotated | 3 | "en": "Recomended citation: A clinical trials corpus annotated | ||
4 | with UMLS\u00a9 entities to enhance the access to Evidence-Based | 4 | with UMLS\u00a9 entities to enhance the access to Evidence-Based | ||
5 | Medicine\r\n Leonardo Campillos-Llanos, Ana Valverde-Mateos, | 5 | Medicine\r\n Leonardo Campillos-Llanos, Ana Valverde-Mateos, | ||
6 | Adri\u00e1n Capllonch-Carri\u00f3n, Antonio Moreno-Sandoval\r\n BMC | 6 | Adri\u00e1n Capllonch-Carri\u00f3n, Antonio Moreno-Sandoval\r\n BMC | ||
7 | Medical Informatics and Decision Making (2021) DOI: | 7 | Medical Informatics and Decision Making (2021) DOI: | ||
8 | 10.1186/s12911-021-01395-z", | 8 | 10.1186/s12911-021-01395-z", | ||
9 | "es": "Cita recomendada: A clinical trials corpus annotated with | 9 | "es": "Cita recomendada: A clinical trials corpus annotated with | ||
10 | UMLS\u00a9 entities to enhance the access to Evidence-Based | 10 | UMLS\u00a9 entities to enhance the access to Evidence-Based | ||
11 | Medicine\r\n Leonardo Campillos-Llanos, Ana Valverde-Mateos, | 11 | Medicine\r\n Leonardo Campillos-Llanos, Ana Valverde-Mateos, | ||
12 | Adri\u00e1n Capllonch-Carri\u00f3n, Antonio Moreno-Sandoval\r\n BMC | 12 | Adri\u00e1n Capllonch-Carri\u00f3n, Antonio Moreno-Sandoval\r\n BMC | ||
13 | Medical Informatics and Decision Making (2021) DOI: | 13 | Medical Informatics and Decision Making (2021) DOI: | ||
14 | 10.1186/s12911-021-01395-z" | 14 | 10.1186/s12911-021-01395-z" | ||
15 | }, | 15 | }, | ||
16 | "author": null, | 16 | "author": null, | ||
17 | "author_email": null, | 17 | "author_email": null, | ||
18 | "autor": { | 18 | "autor": { | ||
19 | "en": [ | 19 | "en": [ | ||
20 | "Leonardo Campillos-Llanos", | 20 | "Leonardo Campillos-Llanos", | ||
21 | "Ana Valverde Mateos", | 21 | "Ana Valverde Mateos", | ||
22 | "Adri\u00e1n Capllonch Carri\u00f3n", | 22 | "Adri\u00e1n Capllonch Carri\u00f3n", | ||
23 | "Antonio Moreno Sandoval" | 23 | "Antonio Moreno Sandoval" | ||
24 | ], | 24 | ], | ||
25 | "es": [ | 25 | "es": [ | ||
26 | "Leonardo Campillos-Llanos", | 26 | "Leonardo Campillos-Llanos", | ||
27 | "Ana Valverde Mateos", | 27 | "Ana Valverde Mateos", | ||
28 | "Adri\u00e1n Capllonch Carri\u00f3n", | 28 | "Adri\u00e1n Capllonch Carri\u00f3n", | ||
29 | "Antonio Moreno Sandoval" | 29 | "Antonio Moreno Sandoval" | ||
30 | ] | 30 | ] | ||
31 | }, | 31 | }, | ||
32 | "conforms_to": [], | 32 | "conforms_to": [], | ||
33 | "coverage_new": {}, | 33 | "coverage_new": {}, | ||
34 | "creator_user_id": "196556b3-e0c4-4c51-a9e6-f51cc752bc37", | 34 | "creator_user_id": "196556b3-e0c4-4c51-a9e6-f51cc752bc37", | ||
35 | "description": { | 35 | "description": { | ||
36 | "en": "A collection of 1200 texts (292 173 tokens) about clinical | 36 | "en": "A collection of 1200 texts (292 173 tokens) about clinical | ||
37 | trials studies and clinical trials announcements in Spanish: - 500 | 37 | trials studies and clinical trials announcements in Spanish: - 500 | ||
38 | abstracts from journals published under a Creative Commons license, | 38 | abstracts from journals published under a Creative Commons license, | ||
39 | e.g. available in PubMed or the Scientific Electronic Library Online | 39 | e.g. available in PubMed or the Scientific Electronic Library Online | ||
40 | (SciELO). - 700 clinical trials announcements published in the | 40 | (SciELO). - 700 clinical trials announcements published in the | ||
41 | European Clinical Trials Register and Repositorio Espa\u00f1ol de | 41 | European Clinical Trials Register and Repositorio Espa\u00f1ol de | ||
42 | Estudios Cl\u00ednicos. Texts were annotated with entities from the | 42 | Estudios Cl\u00ednicos. Texts were annotated with entities from the | ||
43 | Unified Medical Language System semantic groups: anatomy (ANAT), | 43 | Unified Medical Language System semantic groups: anatomy (ANAT), | ||
44 | pharmacological and chemical substances (CHEM), pathologies (DISO), | 44 | pharmacological and chemical substances (CHEM), pathologies (DISO), | ||
45 | and lab tests, diagnostic or therapeutic procedures (PROC). 46 699 | 45 | and lab tests, diagnostic or therapeutic procedures (PROC). 46 699 | ||
46 | entities were annotated (13.98% are nested entities). 10% of the | 46 | entities were annotated (13.98% are nested entities). 10% of the | ||
47 | corpus was doubly annotated, and inter-annotator agreement (IAA) | 47 | corpus was doubly annotated, and inter-annotator agreement (IAA) | ||
48 | achieved a mean F-measure of 85.65% (\u00b14.79, strict match) and a | 48 | achieved a mean F-measure of 85.65% (\u00b14.79, strict match) and a | ||
49 | mean F-measure of 93.94% (\u00b13.31, relaxed match).", | 49 | mean F-measure of 93.94% (\u00b13.31, relaxed match).", | ||
50 | "es": "Colecci\u00f3n de 1200 textos (292 173 tokens) sobre | 50 | "es": "Colecci\u00f3n de 1200 textos (292 173 tokens) sobre | ||
51 | estudios de ensayos cl\u00ednicos y anuncios de ensayos cl\u00ednicos | 51 | estudios de ensayos cl\u00ednicos y anuncios de ensayos cl\u00ednicos | ||
52 | en espa\u00f1ol: - 500 res\u00famenes de revistas publicadas bajo | 52 | en espa\u00f1ol: - 500 res\u00famenes de revistas publicadas bajo | ||
53 | licencia Creative Commons disponibles, por ejemplo, en PubMed o | 53 | licencia Creative Commons disponibles, por ejemplo, en PubMed o | ||
54 | Scientific Electronic Library Online (SciELO). - 700 anuncios de | 54 | Scientific Electronic Library Online (SciELO). - 700 anuncios de | ||
55 | ensayos cl\u00ednicos publicados en el Registro Europeo de Ensayos | 55 | ensayos cl\u00ednicos publicados en el Registro Europeo de Ensayos | ||
56 | Cl\u00ednicos y el Repositorio Espa\u00f1ol de Estudios Cl\u00ednicos. | 56 | Cl\u00ednicos y el Repositorio Espa\u00f1ol de Estudios Cl\u00ednicos. | ||
57 | Los textos fueron anotados con entidades de los grupos sem\u00e1nticos | 57 | Los textos fueron anotados con entidades de los grupos sem\u00e1nticos | ||
58 | del Sistema Unificado de Lenguaje M\u00e9dico: anatom\u00eda (ANAT), | 58 | del Sistema Unificado de Lenguaje M\u00e9dico: anatom\u00eda (ANAT), | ||
59 | sustancias farmacol\u00f3gicas y qu\u00edmicas (CHEM), patolog\u00edas | 59 | sustancias farmacol\u00f3gicas y qu\u00edmicas (CHEM), patolog\u00edas | ||
60 | (DISO) y pruebas de laboratorio, procedimientos diagn\u00f3sticos o | 60 | (DISO) y pruebas de laboratorio, procedimientos diagn\u00f3sticos o | ||
61 | terap\u00e9uticos (PROC). Se anotaron 46 699 entidades (13,98% son | 61 | terap\u00e9uticos (PROC). Se anotaron 46 699 entidades (13,98% son | ||
62 | entidades anidadas). El 10% del corpus fue doblemente anotado y la | 62 | entidades anidadas). El 10% del corpus fue doblemente anotado y la | ||
63 | concordancia entre anotadores (IAA) logr\u00f3 una medida F media del | 63 | concordancia entre anotadores (IAA) logr\u00f3 una medida F media del | ||
64 | 85,65% (\u00b14,79, coincidencia estricta) y una medida F media del | 64 | 85,65% (\u00b14,79, coincidencia estricta) y una medida F media del | ||
65 | 93,94% (\u00b13,31, coincidencia relajada)." | 65 | 93,94% (\u00b13,31, coincidencia relajada)." | ||
66 | }, | 66 | }, | ||
67 | "groups": [], | 67 | "groups": [], | ||
68 | "id": "3dea13e2-76f7-4170-9e7a-c3dc6accffe8", | 68 | "id": "3dea13e2-76f7-4170-9e7a-c3dc6accffe8", | ||
69 | "identifier": "http://hdl.handle.net/10261/285045", | 69 | "identifier": "http://hdl.handle.net/10261/285045", | ||
70 | "international_spatial_translated": { | 70 | "international_spatial_translated": { | ||
71 | "en": "", | 71 | "en": "", | ||
72 | "es": "" | 72 | "es": "" | ||
73 | }, | 73 | }, | ||
74 | "isopen": false, | 74 | "isopen": false, | ||
75 | "issued_date": "2021-02-22T00:00:00", | 75 | "issued_date": "2021-02-22T00:00:00", | ||
76 | "language": [ | 76 | "language": [ | ||
77 | "es", | 77 | "es", | ||
78 | "en" | 78 | "en" | ||
79 | ], | 79 | ], | ||
80 | "license_id": "https://creativecommons.org/publicdomain/zero/1.0/", | 80 | "license_id": "https://creativecommons.org/publicdomain/zero/1.0/", | ||
81 | "license_title": | 81 | "license_title": | ||
82 | "https://creativecommons.org/publicdomain/zero/1.0/", | 82 | "https://creativecommons.org/publicdomain/zero/1.0/", | ||
83 | "maintainer": null, | 83 | "maintainer": null, | ||
84 | "maintainer_email": null, | 84 | "maintainer_email": null, | ||
85 | "metadata_created": "2025-03-04T15:43:09.650331", | 85 | "metadata_created": "2025-03-04T15:43:09.650331", | ||
n | 86 | "metadata_modified": "2025-03-04T15:44:45.307684", | n | 86 | "metadata_modified": "2025-03-04T15:44:45.429584", |
87 | "modified_date": "2021-02-22T00:00:00", | 87 | "modified_date": "2021-02-22T00:00:00", | ||
88 | "multilingual_tags": { | 88 | "multilingual_tags": { | ||
89 | "en": [ | 89 | "en": [ | ||
90 | "Open Access", | 90 | "Open Access", | ||
91 | "Clinical trials", | 91 | "Clinical trials", | ||
92 | "Evidence-Based Medicine", | 92 | "Evidence-Based Medicine", | ||
93 | "Semantic Annotation", | 93 | "Semantic Annotation", | ||
94 | "Inter-Annotator Agreement", | 94 | "Inter-Annotator Agreement", | ||
95 | "Natural Language Processing" | 95 | "Natural Language Processing" | ||
96 | ] | 96 | ] | ||
97 | }, | 97 | }, | ||
98 | "name": | 98 | "name": | ||
99 | notated-with-umls-entities-to-enhance-the-access-to-evidence-based-m", | 99 | notated-with-umls-entities-to-enhance-the-access-to-evidence-based-m", | ||
100 | "notes": null, | 100 | "notes": null, | ||
101 | "num_resources": 2, | 101 | "num_resources": 2, | ||
102 | "num_tags": 0, | 102 | "num_tags": 0, | ||
103 | "organization": { | 103 | "organization": { | ||
104 | "approval_status": "approved", | 104 | "approval_status": "approved", | ||
105 | "created": "2023-09-20T09:39:56.422813", | 105 | "created": "2023-09-20T09:39:56.422813", | ||
106 | "description": "El Centro de Ciencias Humanas y Sociales del CSIC | 106 | "description": "El Centro de Ciencias Humanas y Sociales del CSIC | ||
107 | es un Centro de integraci\u00f3n de servicios que da apoyo a los seis | 107 | es un Centro de integraci\u00f3n de servicios que da apoyo a los seis | ||
108 | institutos que se encuentran alojados en su sede: IEGD, IFS, ILC, | 108 | institutos que se encuentran alojados en su sede: IEGD, IFS, ILC, | ||
109 | ILLA, IH e IPP", | 109 | ILLA, IH e IPP", | ||
110 | "id": "1f353802-ec2a-4559-9d19-43d6574948f9", | 110 | "id": "1f353802-ec2a-4559-9d19-43d6574948f9", | ||
111 | "image_url": "2023-09-20-073956.416958logocchs.png", | 111 | "image_url": "2023-09-20-073956.416958logocchs.png", | ||
112 | "is_organization": true, | 112 | "is_organization": true, | ||
113 | "name": "cchs", | 113 | "name": "cchs", | ||
114 | "state": "active", | 114 | "state": "active", | ||
115 | "title": "Centro de Ciencias Humanas y Sociales (CCHS), CSIC", | 115 | "title": "Centro de Ciencias Humanas y Sociales (CCHS), CSIC", | ||
116 | "type": "organization" | 116 | "type": "organization" | ||
117 | }, | 117 | }, | ||
118 | "owner_org": "1f353802-ec2a-4559-9d19-43d6574948f9", | 118 | "owner_org": "1f353802-ec2a-4559-9d19-43d6574948f9", | ||
119 | "private": false, | 119 | "private": false, | ||
120 | "proyecto": {}, | 120 | "proyecto": {}, | ||
121 | "publisher": "b627d71d-2315-4e75-afc9-897da84459f0", | 121 | "publisher": "b627d71d-2315-4e75-afc9-897da84459f0", | ||
122 | "reference": [], | 122 | "reference": [], | ||
123 | "relationships_as_object": [], | 123 | "relationships_as_object": [], | ||
124 | "relationships_as_subject": [], | 124 | "relationships_as_subject": [], | ||
125 | "resources": [ | 125 | "resources": [ | ||
126 | { | 126 | { | ||
127 | "byte_size": "8,07 kB", | 127 | "byte_size": "8,07 kB", | ||
128 | "cache_last_updated": null, | 128 | "cache_last_updated": null, | ||
129 | "cache_url": null, | 129 | "cache_url": null, | ||
130 | "created": "2025-03-04T15:44:08.808809", | 130 | "created": "2025-03-04T15:44:08.808809", | ||
131 | "datastore_active": false, | 131 | "datastore_active": false, | ||
132 | "description": null, | 132 | "description": null, | ||
133 | "format": "txt", | 133 | "format": "txt", | ||
134 | "hash": "", | 134 | "hash": "", | ||
135 | "id": "74a37986-f9d9-4084-a3f2-3f101dd6966d", | 135 | "id": "74a37986-f9d9-4084-a3f2-3f101dd6966d", | ||
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137 | "metadata_modified": "2025-03-04T15:44:45.309817", | 137 | "metadata_modified": "2025-03-04T15:44:45.309817", | ||
138 | "mimetype": "text/plain", | 138 | "mimetype": "text/plain", | ||
139 | "mimetype_inner": null, | 139 | "mimetype_inner": null, | ||
140 | "name": "README.txt", | 140 | "name": "README.txt", | ||
141 | "name_translated": { | 141 | "name_translated": { | ||
142 | "en": "README.txt", | 142 | "en": "README.txt", | ||
143 | "es": "README.txt" | 143 | "es": "README.txt" | ||
144 | }, | 144 | }, | ||
145 | "package_id": "3dea13e2-76f7-4170-9e7a-c3dc6accffe8", | 145 | "package_id": "3dea13e2-76f7-4170-9e7a-c3dc6accffe8", | ||
146 | "position": 0, | 146 | "position": 0, | ||
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154 | "state": "active", | 154 | "state": "active", | ||
155 | "url": | 155 | "url": | ||
156 | "https://digital.csic.es/bitstream/10261/285045/2/README.txt", | 156 | "https://digital.csic.es/bitstream/10261/285045/2/README.txt", | ||
157 | "url_type": null | 157 | "url_type": null | ||
158 | }, | 158 | }, | ||
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160 | "byte_size": "2,52 MB", | 160 | "byte_size": "2,52 MB", | ||
161 | "cache_last_updated": null, | 161 | "cache_last_updated": null, | ||
162 | "cache_url": null, | 162 | "cache_url": null, | ||
163 | "created": "2025-03-04T15:44:45.312097", | 163 | "created": "2025-03-04T15:44:45.312097", | ||
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166 | "format": "zip", | 166 | "format": "zip", | ||
167 | "hash": "", | 167 | "hash": "", | ||
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171 | "mimetype": "application/zip", | 171 | "mimetype": "application/zip", | ||
172 | "mimetype_inner": null, | 172 | "mimetype_inner": null, | ||
173 | "name": "CT-EBM-SP.zip", | 173 | "name": "CT-EBM-SP.zip", | ||
174 | "name_translated": { | 174 | "name_translated": { | ||
175 | "en": "CT-EBM-SP.zip", | 175 | "en": "CT-EBM-SP.zip", | ||
176 | "es": "CT-EBM-SP.zip" | 176 | "es": "CT-EBM-SP.zip" | ||
177 | }, | 177 | }, | ||
178 | "package_id": "3dea13e2-76f7-4170-9e7a-c3dc6accffe8", | 178 | "package_id": "3dea13e2-76f7-4170-9e7a-c3dc6accffe8", | ||
179 | "position": 1, | 179 | "position": 1, | ||
180 | "resource_identifier": | 180 | "resource_identifier": | ||
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182 | "resource_relation": [], | 182 | "resource_relation": [], | ||
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186 | "state": "active", | 186 | "state": "active", | ||
187 | "url": | 187 | "url": | ||
188 | "https://digital.csic.es/bitstream/10261/285045/1/CT-EBM-SP.zip", | 188 | "https://digital.csic.es/bitstream/10261/285045/1/CT-EBM-SP.zip", | ||
189 | "url_type": null | 189 | "url_type": null | ||
190 | } | 190 | } | ||
191 | ], | 191 | ], | ||
192 | "spatial": [], | 192 | "spatial": [], | ||
t | 193 | "state": "draft", | t | 193 | "state": "active", |
194 | "tags": [], | 194 | "tags": [], | ||
195 | "theme": [ | 195 | "theme": [ | ||
196 | 196 | ||||
197 | "http://datos.gob.es/kos/sector-publico/sector/ciencia-tecnologia", | 197 | "http://datos.gob.es/kos/sector-publico/sector/ciencia-tecnologia", | ||
198 | "http://datos.gob.es/kos/sector-publico/sector/salud" | 198 | "http://datos.gob.es/kos/sector-publico/sector/salud" | ||
199 | ], | 199 | ], | ||
200 | "title": "A clinical trials corpus annotated with UMLS entities to | 200 | "title": "A clinical trials corpus annotated with UMLS entities to | ||
201 | enhance the access to evidence-based medicine", | 201 | enhance the access to evidence-based medicine", | ||
202 | "title_translated": { | 202 | "title_translated": { | ||
203 | "en": "CT-EBM-SP - Corpus of Clinical Trials for | 203 | "en": "CT-EBM-SP - Corpus of Clinical Trials for | ||
204 | Evidence-Based-Medicine in Spanish", | 204 | Evidence-Based-Medicine in Spanish", | ||
205 | "es": "A clinical trials corpus annotated with UMLS entities to | 205 | "es": "A clinical trials corpus annotated with UMLS entities to | ||
206 | enhance the access to evidence-based medicine" | 206 | enhance the access to evidence-based medicine" | ||
207 | }, | 207 | }, | ||
208 | "type": "dataset", | 208 | "type": "dataset", | ||
209 | "url": null, | 209 | "url": null, | ||
210 | "version": null | 210 | "version": null | ||
211 | } | 211 | } |